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INDEXED
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SequenceFile
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IGVFFI6543RTMX
IGVFFI6543RTMX
released
validated
Json view
File Set
IGVFDS3140HFWZ
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 8358
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8358_R1
md5sum
a1fe5a83c864461aa363c45a96dbcd49
Content MD5sum
1e28b2fd87078a71bbf16eafc2aaa756
File Size
2.8 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2212_L7_SS-PKR-532_SS-V1-RIGHT-HALF_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8358
Flowcell ID
22V3MJLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
63996214
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9059OMXR
Tissue
left cerebral cortex
Mus musculus C57BL/6J (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 532)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI8408EECD
yaml
seqspec
seqspec of IGVFFI6543RTMX, IGVFFI8352RIVC
Jason Buenrostro, Broad
1.3 KB
validated