IGVFFI6542FZTQ

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS8614EBXF(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP033_G8_P080_L008_R1

md5sum

1acd9963f3d1c05b9190ca5dd945cea4

Content MD5sum

5da495f59c341fbe3915ba45ccef8a9e

File Size

13 GB

Submitted File Name

Multiome_RNA_RP033_G8_L008_P080_S60_L008_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19NHCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

151

Read Count

147868651

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM5427LJNG

MultiplexedSample

posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, Parkinson's disease

multiplexed sample: Homo sapiens (male, 70 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (female, 70 years) substantia nigra tissue associated with Parkinson's disease; ... and 6 more samples