{
"@context": "/terms/",
"@id": "/sequence-files/IGVFFI6539PSRS/",
"@type": [
"SequenceFile",
"File",
"Item"
],
"accession": "IGVFFI6539PSRS",
"aliases": [
"jesse-engreitz:220829_8merInsertion-Jurkat_Stimulation-Amp_PPIF_promoter-BioRep3-FFrep2-BinF-PCRrep2_I1"
],
"audit": {
"INTERNAL_ACTION": [
{
"category": "mismatched status",
"detail": "Released sequence file [IGVFFI6539PSRS](/sequence-files/IGVFFI6539PSRS/) has in progress subobject auxiliary set [IGVFDS1722KZTW](/auxiliary-sets/IGVFDS1722KZTW/).",
"level": 30,
"level_name": "INTERNAL_ACTION",
"name": "audit_item_status",
"path": "/sequence-files/IGVFFI6539PSRS/"
}
]
},
"award": {
"@id": "/awards/HG011972/",
"component": "functional characterization"
},
"content_md5sum": "ac47d846e3fd7c15683dcaf95fabd3fe",
"content_type": "reads",
"controlled_access": false,
"creation_timestamp": "2023-12-05T20:26:44.853230+00:00",
"file_format": "fastq",
"file_set": "/auxiliary-sets/IGVFDS1722KZTW/",
"file_size": 3293948,
"gene_list_for": [],
"href": "/sequence-files/IGVFFI6539PSRS/@@download/IGVFFI6539PSRS.fastq.gz",
"illumina_read_type": "I1",
"index": "TCCAGCAA:ACTG",
"input_file_for": [],
"integrated_in": [],
"lab": {
"@id": "/labs/jesse-engreitz/",
"title": "Jesse Engreitz, Stanford"
},
"loci_list_for": [],
"maximum_read_length": 8,
"md5sum": "b05a0ab34bfb05e4ea008379bfbdc98f",
"mean_read_length": 8,
"minimum_read_length": 8,
"read_count": 398531,
"release_timestamp": "2023-12-21T00:01:10.692923+00:00",
"s3_uri": "s3://igvf-files/2023/12/05/79a309a4-dbe5-46ec-8bf5-a8de6bae5be2/IGVFFI6539PSRS.fastq.gz",
"schema_version": "14",
"seqspecs": [],
"sequencing_platform": "/platform-terms/EFO_0008566/",
"sequencing_run": 1,
"status": "released",
"submitted_by": {
"@id": "/users/f9e7cd82-a407-4a20-89ee-f4dc668b0cbe/",
"title": "Michael Montgomery"
},
"submitted_file_name": "220829_pPPIF_JurkatVFF-Jurkat-PE2A-BFP-pPPIF-Amp_pPPIF2_S18-BioRep3-FFRep2-BinF-PCRrep2_S210_I1_001.fastq.gz",
"summary": "I1 reads from sequencing run 1",
"upload_status": "validated",
"uuid": "79a309a4-dbe5-46ec-8bf5-a8de6bae5be2"
}