IGVFFI6538JYJJ

released
validated
{
    "@context": "/terms/",
    "@id": "/sequence-files/IGVFFI6538JYJJ/",
    "@type": [
        "SequenceFile",
        "File",
        "Item"
    ],
    "accession": "IGVFFI6538JYJJ",
    "aliases": [
        "jesse-engreitz:auxiliary_file_CRUDO_FAM3C_Auxin6hrs-FF1-BinA-PCR3-Rep1_S187"
    ],
    "audit": {},
    "award": {
        "@id": "/awards/HG011972/",
        "component": "functional characterization"
    },
    "content_md5sum": "36181375f6846662ce8254c21e6cb04a",
    "content_type": "reads",
    "controlled_access": false,
    "creation_timestamp": "2024-06-01T01:53:56.243096+00:00",
    "file_format": "fastq",
    "file_set": "/auxiliary-sets/IGVFDS2599ESDV/",
    "file_size": 33297105,
    "gene_list_for": [],
    "href": "/sequence-files/IGVFFI6538JYJJ/@@download/IGVFFI6538JYJJ.fastq.gz",
    "index": "AAGACACT:ATTG",
    "input_file_for": [],
    "integrated_in": [],
    "lab": {
        "@id": "/labs/jesse-engreitz/",
        "title": "Jesse Engreitz, Stanford"
    },
    "loci_list_for": [],
    "maximum_read_length": 21,
    "md5sum": "8e02f06a2cee4d14b8d02d97bed2b700",
    "mean_read_length": 21,
    "minimum_read_length": 21,
    "read_count": 1541750,
    "release_timestamp": "2024-07-10T20:12:05.411891+00:00",
    "s3_uri": "s3://igvf-files/2024/06/01/d92e9023-ba0f-46d7-a77e-a70ecde4566e/IGVFFI6538JYJJ.fastq.gz",
    "schema_version": "14",
    "seqspecs": [
        "/configuration-files/IGVFFI6401JSRT/"
    ],
    "sequencing_platform": "/platform-terms/EFO_0008565/",
    "sequencing_run": 1,
    "status": "released",
    "submitted_by": {
        "@id": "/users/100f06c6-83a7-4b4d-9dfd-053a1829773b/",
        "title": "Benjamin Doughty"
    },
    "submitted_file_name": "/oak/stanford/groups/engreitz/Projects/Cohesin/220308B014_CCND1_SSFA2_FAM3C/fastq_trim/FAM3C-Auxin6hrs-FF1-BinA-PCR3-Rep1_S187_R1_001.fastq.gz",
    "summary": "reads from sequencing run 1",
    "upload_status": "validated",
    "uuid": "d92e9023-ba0f-46d7-a77e-a70ecde4566e"
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