IGVFFI6529TUVF

released
validated
File Set
IGVFDS0282GEHF(gRNA sequencing for mixed CRISPR TAP-seq integrating a guide (sgRNA) library targeting accessible genome regions in 29 genomic loci)
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
jesse-engreitz:auxiliary_files_CRUDO_TAPseq-Auxin0hrs-Rep1_S3_R2
md5sum
186af531dd9e7a13c157b7e56d43f443
Content MD5sum
ee0bcd9eebb6f3f2cf58d3fea620715e
File Size
321 MB
Submitted File Name
/oak/stanford/groups/engreitz/Projects/Cohesin/221125_Cohesin_TAPseq_v1/221125_Cohesin_TAPseq_v1/outs/fastq_path/L361_S2_L003_R2_001.fastq.gz

Sequencing Details

Sequencing Platform
Sequencing Run
1
Lane
3
Illumina Read Type
R2
Average Read Length
90
Read Count
7041470

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
HCT116 cell line, male, Homo sapiens modified with CRISPRi Sp-dCas9-KOX1-KRAB, inactive AID system targeting RAD21, transfected with a guide library

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI0308CWCN, IGVFFI6069TAYE, IGVFFI6529TUVF
Jesse Engreitz, Stanford
1.2 KB
validated

Attribution