IGVFFI6526VAWR

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS4046FPTG(single-nucleus RNA sequencing assay (10x multiome))

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP029_G8_P078_L008_R1

md5sum

e20fd9e87d8f24ce309a0572bf4ecfd0

Content MD5sum

1a178bcd6c6c041372fffe0f806b3697

File Size

15 GB

Submitted File Name

Multiome_RNA_RP029_G8_L008_P078_S72_L008_R1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

19UBCA4LE

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

151

Read Count

167661195

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM9143IXZW

MultiplexedSample

posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 74 years) putamen tissue associated with Parkinson's disease; Homo sapiens (male, 89 years) posterior cingulate gyrus tissue; ... and 6 more samples