Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI6526BCJI
IGVFFI6526BCJI
released
validated
Json view
File Set
IGVFDS7938OXSK
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R2 reads from sequencing run 5376
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_5376_R2
md5sum
bc2b9929c9c038aba430b7a002a3b028
Content MD5sum
6d78a3c594a7409de82ca4f3c2f188e7
File Size
6.5 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1590_L4_SS-PKR-434_2022-APRIL-R1-SET-OF-192_R2.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
5376
Flowcell ID
22KHF5LT3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
199
Read Count
84258859
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2881UHTO
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 434)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI9503PHEI
yaml
seqspec
seqspec of IGVFFI5362KWQZ, IGVFFI6526BCJI
Jason Buenrostro, Broad
1.3 KB
validated