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INDEXED
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SequenceFile
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IGVFFI6508NCXG
IGVFFI6508NCXG
released
validated
Json view
File Set
IGVFDS7377KJJR
(snM3C-seq)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
chongyuan-luo:pgp_snm3c_C29_day18_L8_R1
md5sum
c06e1b7d959aa9b023f4378c21ee17f2
Content MD5sum
f7b02b85405cac63643e60583791fabf
File Size
2.4 GB
Submitted File Name
/home/ec2-user/igvf/submit/fastq/year2/snm3c/yzcl48/20231016-3C29D18-Pos1-A06_S6_L008_R1_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
Changed from Novaseq 6000 to Novaseq X on 20250224
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Lane
8
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
147.78
Read Count
35055373
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM5419TLSK
InVitroSystem
fibroblast
fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 18 days, Homo sapiens
Attribution
Award
HG012079
Principal Investigator(s)
Kathrin Plath
,
Noah Zaitlen
,
Chongyuan Luo
,
Jason Ernst
,
Roy Wollman
Contact P.I.
Chongyuan Luo
Lab
Chongyuan Luo, UCLA