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IGVFFI6496PUWJ

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS0861MZYT(prime editing Variant-EFFECTS)
Summary
I2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
jesse-engreitz:240908-S029-PPIF_5SpliceSitePool-THP1-PE2_Exp6_NegControl-PCRrep3_I2
md5sum
0c94da7f39ca0ed89c48d268016ef12c
Content MD5sum
435c3971e753ac154d4a8923576386ca
File Size
9.5 MB
Submitted File Name
240908-S029-5splice-THP1-5splicesite_pool-Amp_PPIF_5splicesite-BioRep1-FFrep2-BinNeg-PCRrep1_S992_I2_001.fastq.gz

Sequencing Details

Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Illumina Read Type
I2
Index
GTCATCTA:AGGTGCGT
Average Read Length
8
Read Count
1345910

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
THP-1 cell line, male, Homo sapiens modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
variant effects
variant effects
Jesse Engreitz, Stanford
pending

Attribution

Award
HG011972
Principal Investigator(s)
Contact P.I.
Jesse Engreitz
Lab
Jesse Engreitz, Stanford