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INDEXED
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SequenceFile
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IGVFFI6493BLTQ
IGVFFI6493BLTQ
released
validated
Json view
File Set
IGVFDS4124BSHW
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4089
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4089_R1
md5sum
509487c6c1ccff38636dbc110936656d
Content MD5sum
5eea6e86680b5878d9d24e039364071b
File Size
540 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-741_L3_SS-PKR-205_SS-V1-3rd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
4089
Flowcell ID
22523KLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
9522811
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1100PPNI
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 205)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4650AFDL
yaml
seqspec
seqspec of IGVFFI6493BLTQ, IGVFFI1480ROON, IGVFFI6208VLLY
Jason Buenrostro, Broad
1.3 KB
validated