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INDEXED
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SequenceFile
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IGVFFI6476TXDM
IGVFFI6476TXDM
released
validated
Json view
File Set
IGVFDS2676HFQT
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8537
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8537_R1
md5sum
ed46c81c6c20701475b38e8aa93f2be6
Content MD5sum
424c2f18a1a88acab57d3092cccabbef
File Size
711 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2271_L2_SS-PKR-173_2022-APRIL-R1-PLATE2-1st-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8537
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
15889231
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7503LASU
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 173)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI5470ZPWT
yaml
seqspec
seqspec of IGVFFI6476TXDM, IGVFFI9017OKGQ, IGVFFI2163PCNB
Jason Buenrostro, Broad
1.3 KB
validated