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INDEXED
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SequenceFile
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IGVFFI6475TUAS
IGVFFI6475TUAS
released
validated
Json view
File Set
IGVFDS6327MRII
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8833
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8833_R1
md5sum
990ff0a53c9eee363099dfe435009511
Content MD5sum
79662d70c2e89f6b98b8186cd041a484
File Size
2.2 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2279_L5_SS-PKR-176_2022-APRIL-R1-PLATE2-1st-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8833
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
51068658
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7612HZVW
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 176)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI1292TGUB
yaml
seqspec
seqspec of IGVFFI6475TUAS, IGVFFI5728JBLA, IGVFFI2140PPTS
Jason Buenrostro, Broad
1.3 KB
validated