Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI6473ENPD
IGVFFI6473ENPD
released
validated
Json view
File Set
IGVFDS8367BZNA
(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 1525
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_1525_R2
buenrostro-bernstein:SS-LS_1525_R2
md5sum
8632f9d32011d833aa1e92173491b7e2
Content MD5sum
95b0a0f1d5adbd5088995195676507ff
File Size
3.5 KB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1118_L2_SS-PKR-5_SS-V2-PLATE2-1st-THIRD_R2.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1525
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
149
Read Count
48
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9794GFPU
PrimaryCell
bone marrow
bone marrow cell (cellular sub pool: SS-PKR 5), male, Homo sapiens (49 years)
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4279WJVY
tsv
fragments
GRCh38 fragments
Jason Buenrostro, Broad
13 GB
validated
Attribution
Award
HG011986
Principal Investigator(s)
Bradley Bernstein
,
Jason Buenrostro
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad