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INDEXED
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SequenceFile
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IGVFFI6472XNYJ
IGVFFI6472XNYJ
released
validated
Json view
File Set
IGVFDS0026GUHT
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R2 reads from sequencing run 8355
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8355_R2
md5sum
94c4d42b4c3d46b2483fa83afb34116e
Content MD5sum
31aa4f44200696a28e31195c31bc1677
File Size
5.4 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2209_L7_SS-PKR-530_SS-V1-LEFT-HALF_R2.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8355
Flowcell ID
22V3MJLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R2
Average Read Length
199
Read Count
73558332
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM8703CYDR
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 530)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI7593XCYG
yaml
seqspec
seqspec of IGVFFI6139NSPC, IGVFFI6472XNYJ
Jason Buenrostro, Broad
1.3 KB
validated