IGVFFI6448FTOV

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS2731RLBA(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP014_G7_P062_L007_I2

md5sum

6e7ca90647c7ef89d515f4b7a1927fa9

Content MD5sum

f186c2a2ac662f6dcdf877bf26970816

File Size

344 MB

Submitted File Name

Multiome_RNA_RP014_G7_L007_P062_S35_L007_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223H55LT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

60458526

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM0496VQZI

MultiplexedSample

middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 83 years) putamen tissue associated with Parkinson's disease, cerebral amyloid angiopathy; Homo sapiens (female, 78 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 14 more samples