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IGVFFI6440FNEC

released
validated
File Set
IGVFDS2528FCFL(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 2264
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2264_R1
buenrostro-bernstein:SS-LS_2264_R1
md5sum
f741636e05063107090576c9f8e245b2
Content MD5sum
cf63cf988de1bd8606f7bb4f57330e77
File Size
484 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-28_L1_SS-PKR-3_SS-V1-2nd-THIRD_R1.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2264
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
24954668

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 3), female, Homo sapiens (19 years)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
639 MB
validated

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad