IGVFFI6439RFSE

released

validated

File Set

IGVFDS7758AZUF(CRISPR interference FlowFISH screen sorted on the expression of NFKBIA integrating a guide (sgRNA) library targeting phenotype-associated variants genome-wide associated with blood pressure)

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

guillaume-lettre:BP_screen_KRAB_L_R1_2_read1

md5sum

fd157877285851c0263e084698fe1f6f

Content MD5sum

fa4e0df54948c2a935b3e267aac89331

File Size

40 MB

Submitted File Name

/home/lokensin/projects/rrg-glettre/sequencing_datastore/raw_data/CRISPR_IGVF_20230720/samples/NS.X0085.005.IndexR1_26.2BPR1_L_R1.fastq.gz

Checkfiles Version

Legacy version of checkfiles

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Sequencing Kit

NovaSeq 6000 SP Reagent Kit v1.5

Illumina Read Type

Average Read Length

151

Read Count

984490

Samples

1 item

Accession

Type

Sample Terms

Summary

IGVFSM6293USGF

InVitroSystem

TeloHAEC

TeloHAEC cell line, female, Homo sapiens (sorting details: FACS 20-40% expression of NFKBIA) modified with CRISPRi Sp-dCas9-KOX1-KRAB, transduced (lentivirus) with a guide library