Home
Home
Search (⌘K or ⌃K)
Data
Methodology
Data Model
About
Help
Sign In
INDEXED
Home
/
SequenceFile
/
IGVFFI6431CIVH
IGVFFI6431CIVH
released
validated
Json view
File Set
IGVFDS9836XZJI
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 7388
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_7388_R1
md5sum
17334bc76dc3afa4b1417cbfcdc3f4fc
Content MD5sum
30a50e91cd4a765129357106e2ce54c2
File Size
5.9 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1954_L2_SS-PKR-503_SS-V1-LEFT-HALF_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
7388
Flowcell ID
22KFLYLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
150221525
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM9232VQYX
Tissue
left cerebral cortex
Mus musculus CASTJ (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 503)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4792JCKV
yaml
seqspec
seqspec of IGVFFI6431CIVH, IGVFFI6851KIGV
Jason Buenrostro, Broad
1.2 KB
validated