Home

IGVFFI6401JQRI

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS8822AFTR(single-nucleus RNA sequencing assay (10x multiome))
Summary
I2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
harinder-singh:donor1_Bcell_multiome_GEX_NGS_Day3_4_L003_I2_corrected
md5sum
4261c884df65c20dabfcdab43778ae8e
Content MD5sum
e563dbcac6042ba6942abfdf67e4d0cb
File Size
444 MB
Submitted File Name
/ix/djishnu/peasena/primary_multiome/donor1_upmc/fastqs/scRNA/NP002_02_120222_Singh_Multiome_GEX_LAF4451A12_S14_L003_I2_001.fastq.gz
Checkfiles Version
v19
Attribution
Harinder Singh, University of Pittsburgh

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Lane
3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
I2
Average Read Length
10
Read Count
57633156

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
Homo sapiens (male) B differentiated cell specimen induced to plasmablast for 4 days

Files Derived From This File

3 items
tsv
fragments
fragments
Harinder Singh, University of Pittsburgh
1.9 GB
validated
hdf5
raw feature barcode matrix
cell by gene expression in raw feature barcode matrix
Harinder Singh, University of Pittsburgh
405 MB
validated
csv
barcode to element mapping
barcode to element mapping
Harinder Singh, University of Pittsburgh
17 MB
validated