Home

IGVFFI6400PEKF

released
validated
File Set
IGVFDS4195RKHK(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 2282
File Format
fastq
Content Type
reads
Aliases
bradley-bernstein:SS-LS_2282_R1
buenrostro-bernstein:SS-LS_2282_R1
md5sum
b7deb204db74b45d02cb95928acd8bd1
Content MD5sum
e1d0c51cc4faf87b01112088d33bf096
File Size
255 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-46_L1_SS-PKR-4_SS-V2-PLATE2-2nd-THIRD_R1.fastq.gz
Submitter Comment
This fastq has already been prefiltered with IGVFDS9814BQOF barcode onlist.

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
2282
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
12621679

Samples

1 item
Accession
Type
Sample Terms
Summary
PrimaryCell
bone marrow cell (cellular sub pool: SS-PKR 4), male, Homo sapiens (29 years)

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
h5ad
sparse gene count matrix
cell by gene in sparse gene count matrix
Jason Buenrostro, Broad
639 MB
validated

Attribution

Award
HG011986
Principal Investigator(s)
Contact P.I.
Jason Buenrostro
Lab
Jason Buenrostro, Broad