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IGVFFI6400JYXB

released
validated
File Set
IGVFDS1147YWRU(Parse SPLiT-seq)
Summary
R1 reads from sequencing run 3
File Format
fastq
Content Type
reads
md5sum
b03af15b101e6e84b6b3dd33d04ecc80
Content MD5sum
4f785afae20c958545dff8e347a15206
File Size
12 GB
Submitted File Name
igvf_011/nova1/igvf_011_B05_D_nova_N1_L003_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Ali Mortazavi, UCI

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
3
Flowcell ID
HCGMMDSX7
Lane
3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
140
Read Count
169093646

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Mus musculus NZO/H1LtJ (female, 69 days) gastrocnemius tissue; Mus musculus NZO/H1LtJ (male, 69 days) left hippocampal formation tissue; ... and 190 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tar
sparse gene count matrix
cell by gene in sparse gene count matrix
Ali Mortazavi, UCI
1.3 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI6400JYXB, IGVFFI3717YAML
Ali Mortazavi, UCI
1.4 KB
validated