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INDEXED
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SequenceFile
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IGVFFI6396LUZG
IGVFFI6396LUZG
released
validated
Json view
File Set
IGVFDS3140XYDB
(snM3C-seq)
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
chongyuan-luo:pgp_snm3c_C37_day7_L3_R1
md5sum
ce4bd14e89bc0b993acd489c75f99d33
Content MD5sum
ace6fd9a2e5bb506333d800160f38c89
File Size
2.9 GB
Submitted File Name
/home/ec2-user/igvf/submit/fastq/year2/snm3c/yzcl47/20231005-3C37D7-Pos1-C07_S28_L003_R1_001.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Submitter Comment
Changed from Novaseq 6000 to Novaseq X on 20250224
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Lane
3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
148.7
Read Count
42249703
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM8061EIMU
InVitroSystem
fibroblast
fibroblast reprogrammed cell specimen induced to induced pluripotent stem cell for 7 days, Homo sapiens
Attribution
Award
HG012079
Principal Investigator(s)
Kathrin Plath
,
Noah Zaitlen
,
Chongyuan Luo
,
Jason Ernst
,
Roy Wollman
Contact P.I.
Chongyuan Luo
Lab
Chongyuan Luo, UCLA