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INDEXED
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SequenceFile
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IGVFFI6362BVFD
IGVFFI6362BVFD
released
validated
Json view
File Set
IGVFDS9953SCFR
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8276
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8276_R1
md5sum
7db730eada85ee84c1d96e3c884f1147
Content MD5sum
555244c36dcbf4e79e11b838d0269b5b
File Size
4.1 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2154_L2_SS-PKR-530_SS-V1-RIGHT-HALF_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8276
Flowcell ID
22TMH5LT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
96227792
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM0205CCTB
Tissue
left cerebral cortex
Mus musculus C57BL/6J (male) left cerebral cortex tissue (cellular sub pool: SS-PKR 530)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI1601ZCGP
yaml
seqspec
seqspec of IGVFFI6362BVFD, IGVFFI2665IMRB
Jason Buenrostro, Broad
1.3 KB
validated