IGVFFI6356JMWU

released
validated
File Set
IGVFDS0286JWIW(unsorted FACS input CRISPR prime editing Variant-EFFECTS integrating a guide (sgRNA) library targeting sequence variants in a genomic locus)
Summary
R1 reads from sequencing run 2
File Format
fastq
Content Type
reads
Aliases
jesse-engreitz:220228_8merInsertion-THP1-Amp_PPIF_promoter-BioRep4-FFrep3-FACS_Input-PCRrep1_R1
md5sum
ef0915dbf0a138f622ae5efc2b9afd08
Content MD5sum
e81f8e69209443500cc1d8afb0a7153a
File Size
8.2 MB
Submitted File Name
220426pPPIF_REPEAT-THP1-Gen8b-pPPIF-Amp_pPPIF-BioRep2-FFRep3-BinAll-PCRrep1_S42_R1_001.fastq.gz

Sequencing Details

Sequencing Platform
Sequencing Run
2
Illumina Read Type
R1
Index
CCTTCGCA:ACTG
Average Read Length
150
Read Count
353360

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
THP-1 cell line, male, Homo sapiens modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2), transfected with a guide library

Attribution