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INDEXED
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SequenceFile
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IGVFFI6355XCLV
IGVFFI6355XCLV
released
validated
Json view
File Set
IGVFDS9455NVTH
(untreated RNA-seq)
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
charles-gersbach:measurement-set-bulk-rna-control-ipsc-cm-rep2-R2
md5sum
27b74efcd6c3ef4cce26b7256c296066
Content MD5sum
c7bbf6dbb4a2be7f54705864da5c004f
File Size
3.4 GB
Submitted File Name
/datacommons/gersbachlab/tda17/Anglen_7276_210923B6_RNAseq/data/rna_seq/processed_raw_reads/Anglen_7276_210923B6_RNAseq/control.2.rna.R2.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Charles Gersbach, Duke
(
HG012053
—
Charles Gersbach
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
150
Read Count
41597952
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7542AMUP
InVitroSystem
GM25256 (WTC-11)
Homo sapiens (male) GM25256 (WTC-11) differentiated cell specimen induced to cardiac muscle cell for 28 days
Files Derived From This File
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4143PXEA
bam
transcriptome alignments
GRCh38 filtered transcriptome alignments
Charles Gersbach, Duke
2.8 GB
validated