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INDEXED
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SequenceFile
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IGVFFI6345JJRB
IGVFFI6345JJRB
released
validated
Json view
File Set
IGVFDS0843IWXJ
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 3993
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_3993_R1
md5sum
999caaf15e5ea872e99baa5e174af4e9
Content MD5sum
e3c6872e29901ba950e4999d59a32c3e
File Size
1.9 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-698_L7_SS-PKR-182_2022-APRIL-R1-PLATE2-1st-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
3993
Flowcell ID
22523KLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
36129980
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2678UWOW
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to endodermal cell for 2 days (cellular sub pool: SS-PKR 182)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI4621XZAH
yaml
seqspec
seqspec of IGVFFI6345JJRB, IGVFFI2610HGSB, IGVFFI5126ZEQK
Jason Buenrostro, Broad
1.4 KB
validated