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INDEXED
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SequenceFile
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IGVFFI6339VFOG
IGVFFI6339VFOG
released
validated
Json view
File Set
IGVFDS7400VLBE
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 3922
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_3922_R1
md5sum
193ad2509f85bb14ae1deee4dc2ecc8c
Content MD5sum
553cff7c72a224ca4b7af738cbe7c649
File Size
1.5 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-779_L5_SS-PKR-176_SS-V1-1st-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
3922
Flowcell ID
22523KLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
150
Read Count
29478530
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2983PFUY
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled cell specimen (cellular sub pool: SS-PKR 176)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI5288PGQH
yaml
seqspec
seqspec of IGVFFI6339VFOG, IGVFFI2297CZAD, IGVFFI1154AFBV
Jason Buenrostro, Broad
1.3 KB
validated