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IGVFFI6337LBXU

released
validated
File Set
IGVFDS7744TQIF(single-nucleus ATAC-seq (10x multiome with MULTI-seq))
Summary
I1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
ansuman-satpathy:igvf_exp18_atac_10x2_NGS1_i1
md5sum
fa984bff08251b17751ae911a3492a33
Content MD5sum
688b2a239a2096fa4238f237b8f15fdd
File Size
6.4 GB
Submitted File Name
/oak/stanford/groups/satpathy/users/backup/cmcg/igvf18/ATAC/ATAC2-CMAS23A_S34_L006_I1_001.fastq.gz
Checkfiles Version
v14
Attribution
Ansuman Satpathy, Stanford

Sequencing Details

Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Flowcell ID
22FL7YLT4
Lane
1
Sequencing Kit
NovaSeq X Series 25B Reagent Kit
Illumina Read Type
I1
Average Read Length
8
Read Count
837555274

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (female) IMR-90 cell line; Homo sapiens (female) MCF-7 cell line; ... and 17 more samples

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
fragments
fragments
Ansuman Satpathy, Stanford
5.2 GB
validation exempted

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI8408YXMK, IGVFFI0241PHEX, IGVFFI1280ZQJU, IGVFFI6337LBXU
Ansuman Satpathy, Stanford
1.4 KB
validated