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INDEXED
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SequenceFile
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IGVFFI6336LSGT
IGVFFI6336LSGT
released
validated
Json view
File Set
IGVFDS1227FUJY
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 8368
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8368_R1
md5sum
be8d1836fbf710bb3c1a0ddd59087edf
Content MD5sum
c30007ccbeef9a7376ddbc8c399a4de2
File Size
1.5 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2222_L7_SS-PKR-584_SS-V1-RIGHT-HALF_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8368
Flowcell ID
22V3MJLT3
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
35444264
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM1865KZPO
Tissue
left cerebral cortex
Mus musculus CAST/EiJ (female) left cerebral cortex tissue (cellular sub pool: SS-PKR 584)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI9093VZYJ
yaml
seqspec
seqspec of IGVFFI6336LSGT, IGVFFI2297VQWT
Jason Buenrostro, Broad
1.3 KB
validated