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SequenceFile
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IGVFFI6269NEMO
IGVFFI6269NEMO
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS8191ULWV
(single-nucleus RNA sequencing assay (10x multiome))
Summary
R2 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
igvf:corces_sequenceFile_RNA_RP009_G3_P058_L004_R2
md5sum
5017242b7d45318fc1e909fd0e9381b5
Content MD5sum
b414bff9648b804c1a0d62d68edc4a6d
File Size
2.4 GB
Submitted File Name
Multiome_RNA_RP009_G3_L003_P058_S11_L004_R2_001.fastq.gz
Checkfiles Version
v20
Attribution
Ryan Corces, Gladstone Institute UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
1
Flowcell ID
223HCCLT3
Lane
4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R2
Average Read Length
90
Read Count
56389274
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM6201VKVB
MultiplexedSample
cerebellar cortex
,
middle temporal gyrus
,
posterior cingulate gyrus
,
putamen
,
substantia nigra
Alzheimer disease
,
cerebral amyloid angiopathy
,
multiple sclerosis
,
Parkinson's disease
multiplexed sample: Homo sapiens (female, 70 years) middle temporal gyrus tissue associated with Parkinson's disease; Homo sapiens (male, 75 years) cerebellar cortex tissue associated with Parkinson's disease, cerebral amyloid angiopathy; ... and 10 more samples