IGVFFI6265RPRM

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS5071AEIH(single-nucleus RNA sequencing assay (10x multiome))

Summary

I1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP012_G8_P060_L006_I1

md5sum

272a40745f0185de7a074c6c5ec2a23c

Content MD5sum

699fd05c4b79e191d3ba9008d91c768e

File Size

366 MB

Submitted File Name

Multiome_RNA_RP012_G8_L008_P060_S40_L006_I1_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223HCCLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

65336727

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM9167CXIN

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 79 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 89 years) substantia nigra tissue; ... and 14 more samples