Home

IGVFFI6265KQIS

preview
validated
This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS5070YLLC(single-nucleus RNA sequencing assay (10x multiome))
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
igvf:corces_sequenceFile_RNA_X038_G4_P040_L004_R1
md5sum
fd41d7e17d940326b8f99027519aa2dc
Content MD5sum
629aa091b862658c0885ef91c3dc4d2c
File Size
3.7 GB
Submitted File Name
Multiome_RNA_X038_G4_L004_P040_S18_L004_R1_001.fastq.gz
Checkfiles Version
v20

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Flowcell ID
H5VM5DSX7
Lane
4
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
28
Read Count
177963131

Samples

1 item
Accession
Type
Sample Terms
Disease Terms
Summary
MultiplexedSample
multiplexed sample: Homo sapiens (male, 79 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 84 years) cerebellar cortex tissue associated with Parkinson's disease, mild cognitive impairment; ... and 10 more samples

Attribution

Award
HG012076
Principal Investigator(s)
Contact P.I.
Ansuman Satpathy
Lab
Ryan Corces, Gladstone Institute UCSF