IGVFFI6245MVJE

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS6766ZMIC(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X037_G7_P038_L002_I2

md5sum

1c69d267c72c5cf43e2e0b6d74e0fd56

Content MD5sum

243e6b86aed1989f2a480c15f98ae8b1

File Size

1.5 GB

Submitted File Name

Multiome_RNA_X037_G7_L007_P038_S13_L002_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

H5VM5DSX7

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

217319351

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM2874KTFO

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (female, 81 years) cerebellar cortex tissue associated with Parkinson's disease; Homo sapiens (male, 81 years) putamen tissue associated with Parkinson's disease; ... and 10 more samples