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INDEXED
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SequenceFile
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IGVFFI6238XUIY
IGVFFI6238XUIY
released
validated
Json view
File Set
IGVFDS5083GBBF
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 5368
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_5368_R1
md5sum
ca8a758387f0df2bdab4ac4113d5acf1
Content MD5sum
9022cdcfa79665e3f045cfe97cad2ec7
File Size
5.9 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1578_L2_SS-PKR-436_2022-APRIL-R1-SET-OF-192_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
5368
Flowcell ID
22KHF5LT3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
100
Read Count
135740751
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4321WQTD
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 436)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI9596GYXI
yaml
seqspec
seqspec of IGVFFI6238XUIY, IGVFFI7345VKMC
Jason Buenrostro, Broad
1.3 KB
validated