IGVFFI6235MNEI

released

validated

File Set

IGVFDS5864UGFT(untransfected prime editing Variant-EFFECTS)

Summary

R1 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

jesse-engreitz:230807S022-THP1-P153-Amp_PPIF_promoter-THP1-PE2_Exp2_NegControl-PCRrep4_R1

md5sum

a7fed920cd5b418677b3aca19356c8f5

Content MD5sum

7295d68fa42cbd65a28247b50401d692

File Size

3.9 MB

Submitted File Name

230807S022-THP1-P153-Amp_PPIF_promoter-BioRep1-FFrepNA-BinNeg-PCRrep4_S420_R1_001.fastq.gz

Sequencing Details

Sequencing Platform

Illumina NextSeq 550

Sequencing Run

Illumina Read Type

Index

TGTAATCA:TTGT

Average Read Length

150

Read Count

141745

Samples

1 item

Accession

Type

Sample Terms

Summary

IGVFSM7075RRIN

InVitroSystem

THP-1

THP-1 cell line, male, Homo sapiens modified with CRISPR prime editing Sp-nCas9-M-MLV RT (PE2)

Attribution

Award

HG011972

Principal Investigator(s)

Anshul Kundaje, Jesse Engreitz, Marlene Rabinovitch, Lars Steinmetz, Michael Bassik, Thomas Quertermous, Will Greenleaf

Contact P.I.

Jesse Engreitz

Lab

Jesse Engreitz, Stanford