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INDEXED
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SequenceFile
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IGVFFI6227GVAN
IGVFFI6227GVAN
released
validated
Json view
File Set
IGVFDS8623UWKX
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 3821
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_3821_R1
md5sum
9aa35cc238305fb4faa81a8c0e88b977
Content MD5sum
039faa875af0f585993b09b6edc75d7c
File Size
541 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1536_L1_SS-PKR-434_2022-APRIL-R1-SET-OF-192_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
3821
Flowcell ID
H22KKDRX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
100
Read Count
11031274
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2881UHTO
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 434)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2665KLTA
yaml
seqspec
seqspec of IGVFFI6227GVAN, IGVFFI4731HIPN
Jason Buenrostro, Broad
1.3 KB
validated