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INDEXED
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SequenceFile
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IGVFFI6221LEKK
IGVFFI6221LEKK
preview
validated
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This object is in preview status. Metadata is subject to change until this object is released.
File Set
IGVFDS7029XULI
(single-nucleus ATAC-seq (10x multiome))
Summary
R1 reads from sequencing run 5
File Format
fastq
Content Type
reads
Aliases
jimmie-ye:XX1-SC1_snATAC_S4_R1
md5sum
8327bccd809572f526e012ff66914974
Content MD5sum
9c00c0f7d235f2c601e21bfab5e1958a
File Size
5.3 GB
Submitted File Name
production_data/xhlt1/data/single_cell_ATAC/raw/XHLT1-POOL-XX1-SC1/BHM2VLDSX2/XHLT1-POOL-XX1-SC1-ATAC_S1_L004_R1_001.fastq.gz
Checkfiles Version
v17
Attribution
Jimmie Ye, UCSF
(
HG012076
—
Ansuman Satpathy
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
50
Read Count
169344286
Samples
1 item
Accession
Type
Sample Terms
Disease Terms
Summary
IGVFSM9228JYFS
MultiplexedSample
peripheral blood mononuclear cell
multiplexed sample: Homo sapiens (male, 39.0 years) peripheral blood mononuclear cell; Homo sapiens (female, 28.0 years) peripheral blood mononuclear cell; ... and 18 more samples