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INDEXED
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SequenceFile
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IGVFFI6211UCEG
IGVFFI6211UCEG
released
validated
Json view
File Set
IGVFDS4653HFNR
(single-cell ATAC-seq (SHARE-seq))
Summary
R2 reads from sequencing run 5361
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_5361_R2
md5sum
7a503b6b0e71de02e7b147ee83054096
Content MD5sum
7275a2ce276deae62b5f27002ee96552
File Size
10 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1576_L1_SS-PKR-434_2022-APRIL-R1-SET-OF-192_R2.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
5361
Flowcell ID
22KHF5LT3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R2
Average Read Length
199
Read Count
165590956
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2881UHTO
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 434)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI3216RCJI
yaml
seqspec
seqspec of IGVFFI9683RWGO, IGVFFI6211UCEG
Jason Buenrostro, Broad
1.2 KB
validated