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IGVFFI6167AJYF

released
validated
File Set
IGVFDS9059ORGF(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 1
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:surya-DSS21BC-8k-ATAC.R1.fastq.gz
md5sum
f52a874a80aa05435cba6f32f8d330a1
Content MD5sum
92127d127ad2b575556d957169f23066
File Size
2.0 GB
Submitted File Name
gs://sw-igvf-submission/surya-mouse-colitis/submit-fqs/DSS21BC-8k-ATAC.R1.fastq.gz
Checkfiles Version
v14
Attribution
Jason Buenrostro, Broad

Sequencing Details

Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
1
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
49.11
Read Count
62700495

Samples

1 item
Accession
Type
Sample Terms
Summary
InVitroSystem
Mus musculus C57BL/6J colonic epithelium organoid induced to colon for 27 days

Files Derived From This File

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
tsv
fragments
fragments
Jason Buenrostro, Broad
2.3 GB
validated

Associated seqspec Files

1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
yaml
seqspec
seqspec of IGVFFI8793QBEK, IGVFFI6167AJYF, IGVFFI2751XKQB
Jason Buenrostro, Broad
1.2 KB
validated