IGVFFI6146UJPV

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS1304MSEA(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP002_G3_P052_L002_I2

md5sum

cbd9b9ab2b6a1bcfe4d0c6c76965caf0

Content MD5sum

dabd357be99cc299b2b0485e9d8a4fcc

File Size

363 MB

Submitted File Name

Multiome_RNA_RP002_G3_L003_P052_S11_L002_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223JJGLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

63306175

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM6307OPWX

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 73 years) putamen tissue; Homo sapiens (male, 82 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 10 more samples