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INDEXED
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SequenceFile
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IGVFFI6125FKCF
IGVFFI6125FKCF
released
validated
Json view
File Set
IGVFDS1592MBRQ
(single-cell RNA sequencing assay (SHARE-seq))
Summary
R1 reads from sequencing run 7378
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_7378_R1
md5sum
07961527f89889ed786d3b9559bca0c1
Content MD5sum
7c544a594ca8c9a6299b9c3673484632
File Size
9.6 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-1917_L8_SS-PKR-435_2022-APRIL-R1-SET-OF-192_R1.fastq.gz
Checkfiles Version
v17
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
7378
Flowcell ID
22KFF5LT3
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
100
Read Count
230036150
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4121TWUU
Tissue
brain
Mus musculus C57BL/6 brain tissue (cellular sub pool: SS-PKR 435)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI2312GTSH
yaml
seqspec
seqspec of IGVFFI6125FKCF, IGVFFI4314ECXU
Jason Buenrostro, Broad
1.3 KB
validated