IGVFFI6123LRLB

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS1310UDQP(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP008_G6_P058_L002_R2

md5sum

27be127110e7ea089d6902b6b7dd8c37

Content MD5sum

ebc97960b34363af4ed89f4f3ff6f3fc

File Size

2.6 GB

Submitted File Name

Multiome_RNA_RP008_G6_L006_P058_S6_L002_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223HCCLT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

62039917

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM7190BHUX

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (male, 69 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 79 years) substantia nigra tissue associated with Parkinson's disease; ... and 10 more samples