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INDEXED
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SequenceFile
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IGVFFI6116RHHH
IGVFFI6116RHHH
released
validated
Json view
File Set
IGVFDS8726KDVX
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 9019
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_9019_R1
md5sum
3e2544a11d1bbcae81c818c2ae3ee801
Content MD5sum
8e27de750c35b956ec1ec89522ff5fe7
File Size
494 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2273_L7_SS-PKR-173_SS-V1-3rd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
9019
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
10911099
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM2760XEJI
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 173)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI5042SCXH
yaml
seqspec
seqspec of IGVFFI6116RHHH, IGVFFI1623MIHD, IGVFFI1322GRJY
Jason Buenrostro, Broad
1.3 KB
validated