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INDEXED
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SequenceFile
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IGVFFI6101DTLP
IGVFFI6101DTLP
released
validated
Json view
File Set
IGVFDS6028HMKC
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4336
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4336_R1
md5sum
976abb37339cf20b3e231a6d10432c66
Content MD5sum
b3192d9fd599df26985f1d484c23b945
File Size
6.1 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-534_L1_SS-PKR-170_SS-V1-1st-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
4336
Flowcell ID
H75F7DSX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
150
Read Count
93446826
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM4283NRHT
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled cell specimen (cellular sub pool: SS-PKR 170)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI3604FPPZ
yaml
seqspec
seqspec of IGVFFI6101DTLP, IGVFFI9138JKUA, IGVFFI2990ZXZC
Jason Buenrostro, Broad
1.3 KB
validated