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INDEXED
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SequenceFile
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IGVFFI6090PJAT
IGVFFI6090PJAT
released
validated
Json view
File Set
IGVFDS3373WDMA
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 9147
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_9147_R1
md5sum
3256efa981ac425d20a828b6d799dced
Content MD5sum
7238c8d9b584576185e07c8601a53e55
File Size
688 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2305_L8_SS-PKR-180_SS-V1-2nd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
9147
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
15338098
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM6804CCZD
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 5 days (cellular sub pool: SS-PKR 180)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI3638ANGM
yaml
seqspec
seqspec of IGVFFI6090PJAT, IGVFFI3082XDTG, IGVFFI7269IPRQ
Jason Buenrostro, Broad
1.3 KB
validated