IGVFFI6083OYGR

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS5571RDTA(single-nucleus RNA sequencing assay (10x multiome))

Summary

I2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_RP013_G7_P062_L005_I2

md5sum

ae055c34fd2504c83fb39fca6a042a1b

Content MD5sum

7b76a318f354fce0b9edb2c0bf8500e9

File Size

339 MB

Submitted File Name

Multiome_RNA_RP013_G7_L007_P062_S27_L005_I2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq X

Sequencing Run

Flowcell ID

223H55LT3

Lane

Sequencing Kit

NovaSeq X Series 10B Reagent Kit

Illumina Read Type

Average Read Length

Read Count

58842306

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM7012MRMQ

MultiplexedSample

middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

Alzheimer disease, cerebral amyloid angiopathy, mild cognitive impairment, multiple sclerosis, Parkinson's disease

multiplexed sample: Homo sapiens (female, 86 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (male, 78 years) posterior cingulate gyrus tissue associated with Parkinson's disease; ... and 14 more samples