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INDEXED
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SequenceFile
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IGVFFI6071SZZG
IGVFFI6071SZZG
released
validated
Json view
File Set
IGVFDS3629MIXK
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8613
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8613_R1
md5sum
7aeda414035b050c0c5412ef51e3504b
Content MD5sum
c0dd3ce52da2c29a70eb959b5874326c
File Size
1.1 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2347_L2_SS-PKR-207_2022-APRIL-R1-PLATE2-3rd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8613
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
24212933
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM0700KOZX
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 207)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI8829NVLC
yaml
seqspec
seqspec of IGVFFI6071SZZG, IGVFFI3557EHEH, IGVFFI1714EIGG
Jason Buenrostro, Broad
1.3 KB
validated