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INDEXED
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SequenceFile
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IGVFFI6052JGNQ
IGVFFI6052JGNQ
released
validated
Json view
File Set
IGVFDS8970MJXV
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 4338
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_4338_R1
md5sum
c5af478b60273fa331c6b89ef0b811ae
Content MD5sum
6c25b5c0904a03366afcdec50482e602
File Size
3.0 GB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-538_L1_SS-PKR-172_SS-V1-3rd-THIRD_R1.fastq.gz
Checkfiles Version
Legacy version of checkfiles
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq 6000
Sequencing Run
4338
Flowcell ID
H75F7DSX5
Sequencing Kit
NovaSeq 6000 S4 Reagent Kit v1.5
Illumina Read Type
R1
Average Read Length
150
Read Count
47091835
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM7032AAKE
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to neural progenitor cell for 10 days (cellular sub pool: SS-PKR 172)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI0444BIGS
yaml
seqspec
seqspec of IGVFFI6052JGNQ, IGVFFI6624CJCN, IGVFFI8419ZWIY
Jason Buenrostro, Broad
1.3 KB
validated