IGVFFI6051BDNI

preview

validated

This object is in preview status. Metadata is subject to change until this object is released.

File Set

IGVFDS9966TLZG(single-nucleus RNA sequencing assay (10x multiome))

Summary

R2 reads from sequencing run 1

File Format

fastq

Content Type

reads

Aliases

igvf:corces_sequenceFile_RNA_X026_G7_P026_L002_R2

md5sum

82b22bb2bc06b46cddd8c8ca8f0bb168

Content MD5sum

45d000ec7fdcc6f321d3e4fd7feb3dd2

File Size

9.1 GB

Submitted File Name

Multiome_RNA_X026_G7_L007_P026_S8_L002_R2_001.fastq.gz

Checkfiles Version

v20

Attribution

Ryan Corces, Gladstone Institute UCSF

(

HG012076 — Ansuman Satpathy

)

Sequencing Details

Sequencing Platform

Illumina NovaSeq 6000

Sequencing Run

Flowcell ID

HV737DSX5

Lane

Sequencing Kit

NovaSeq 6000 S4 Reagent Kit v1.5

Illumina Read Type

Average Read Length

Read Count

187750465

Samples

1 item

Accession

Type

Sample Terms

Disease Terms

Summary

IGVFSM8499MYWL

MultiplexedSample

cerebellar cortex, middle temporal gyrus, posterior cingulate gyrus, putamen, substantia nigra

cerebral amyloid angiopathy, mild cognitive impairment, Parkinson's disease

multiplexed sample: Homo sapiens (male, 69 years) substantia nigra tissue associated with Parkinson's disease; Homo sapiens (female, 78 years) middle temporal gyrus tissue associated with Parkinson's disease; ... and 10 more samples