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SequenceFile
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IGVFFI6004JMIX
IGVFFI6004JMIX
released
validated
Json view
File Set
IGVFDS2234GUSK
(single-cell ATAC-seq (SHARE-seq))
Summary
R1 reads from sequencing run 8505
File Format
fastq
Content Type
reads
Aliases
buenrostro-bernstein:SS-LS_8505_R1
md5sum
7c3b9fe4f18e49b549fcc57a9a9a90e0
Content MD5sum
e3a5ce0bbbccfa81bc04ab8401e2e74a
File Size
822 MB
Submitted File Name
gs://broad-epi-ss-lane-subsets/SS-CoPA-2335_L1_SS-PKR-199_2022-APRIL-R1-PLATE2-3rd-THIRD_R1.fastq.gz
Checkfiles Version
v20
Attribution
Jason Buenrostro, Broad
(
HG011986
—
Jason Buenrostro
)
Sequencing Details
Sequencing Platform
Illumina NovaSeq X
Sequencing Run
8505
Flowcell ID
22LMVNLT4
Sequencing Kit
NovaSeq X Series 10B Reagent Kit
Illumina Read Type
R1
Average Read Length
100
Read Count
18566877
Samples
1 item
Accession
Type
Sample Terms
Summary
IGVFSM8255TRGO
InVitroSystem
induced pluripotent stem cell
Homo sapiens induced pluripotent stem pooled differentiated cell specimen induced to hepatic oval stem cell for 7 days (cellular sub pool: SS-PKR 199)
Associated seqspec Files
1 item
Accession
File Format
Content Type
Summary
Lab
File Size
Upload Status
IGVFFI1327DSLJ
yaml
seqspec
seqspec of IGVFFI6004JMIX, IGVFFI7186IRSO, IGVFFI1929ROYE
Jason Buenrostro, Broad
1.3 KB
validated